{"id":591,"date":"2017-07-14T11:43:17","date_gmt":"2017-07-14T11:43:17","guid":{"rendered":"http:\/\/joshmitteldorf.peachpuff-wolverine-566518.hostingersite.com\/?p=591"},"modified":"2017-07-14T11:43:17","modified_gmt":"2017-07-14T11:43:17","slug":"mitochondria-in-aging-i-mechanisms-and-background","status":"publish","type":"post","link":"https:\/\/scienceblog.com\/joshmitteldorf\/2017\/07\/14\/mitochondria-in-aging-i-mechanisms-and-background\/","title":{"rendered":"Mitochondria in Aging, I Mechanisms and Background"},"content":{"rendered":"<p><i><span style=\"font-weight: 400\">A popular theory a generation back sought to trace aging to oxidative damage originating in the mitochondria. \u00a0Every cell in the body has hundreds or thousands of mitochondria, the sites of the high-energy chemistry that produces ROS as toxic waste. The hope was that by quenching the ROS, aging might be turned off. The \u201cMitochondrial Free Radical Theory\u201d is built on a flawed theoretical foundation, and <\/span><\/i><a href=\"https:\/\/scienceblog.com\/joshmitteldorf\/2012\/11\/19\/anti-oxidants-a-disappointment-or-worse\/\"><i><span style=\"font-weight: 400\">anti-oxidants don\u2019t extend lifespan<\/span><\/i><\/a><i><span style=\"font-weight: 400\">. Nevertheless, the mitochondria play a role in aging. \u00a0Historically, mitochondria were mediators of the first organized mechanisms of programmed death over a billion years ago, and they retain a role in processing signals that regulate lifespan. \u00a0Curiously, though a quadrillion mitochondria are dispersed through the body, they act in some ways like a single organ, sending coordinated signals that regulate metabolism and affect aging.<\/span><\/i><\/p>\n<hr \/>\n<p><span style=\"font-weight: 400\">Mitochondria are in the cells of all plants and animals<\/span><span style=\"font-weight: 400\">\u2014<\/span><span style=\"font-weight: 400\">hundreds or thousands of mini power plants in each cell. \u00a0They burn sugar to make electrochemical energy in a form the cell can use. \u00a0They are loyal and essential servants. \u00a0But it wasn\u2019t always so. \u00a0More than a billion years ago, mitochondria came into the cell as invading bacteria. \u00a0Though they\u2019ve long ago been domesticaed, they retain a bit of their autonomy as a relic of the past. \u00a0Mitochondria have their own DNA. \u00a0Like bacteria, mitochondrial DNA is in the form of loop, a <\/span><a href=\"https:\/\/en.wikipedia.org\/wiki\/Plasmid\"><span style=\"font-weight: 400\">plasmid<\/span><\/a><span style=\"font-weight: 400\"> rather than a chromosome. \u00a0Each mitochondrion keeps several copies of the plasmid. \u00a0<\/span><\/p>\n<p><span style=\"font-weight: 400\">Mitochondria retain from their distant pathological past the capacity to kill the cell. \u00a0This is an orderly process known as apoptosis=programmed cell death. \u00a0Mitochondria are not the jurors that sentence the cell to death, but only the executioners acting on external signals. <\/span><\/p>\n<p><span style=\"font-weight: 400\">Aging of the body as a whole is centrally coordinated, though the nature and location of the clock(s) remain a major unsolved problem. \u00a0Communication about the age state of the body is carried through signal molecules in the blood, and tissues respond accordingly. \u00a0Mitochondria not only pick up on these signals, they also contribute circulating signals of their own. \u00a0Apoptosis is dialed up in old age. \u00a0Along with inflammation, it is a primary, local mode of the self-destructive process that is aging. \u00a0We lose too many cells to apoptosis, cells that are still healthy and useful, and mitochondria are the proximate cause of this loss.<\/span><\/p>\n<figure style=\"width: 890px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/images.fineartamerica.com\/images-medium-large\/mitochondrion-sem-dr-david-furness-keele-university.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"size-large\" src=\"https:\/\/images.fineartamerica.com\/images-medium-large\/mitochondrion-sem-dr-david-furness-keele-university.jpg\" width=\"900\" height=\"627\" \/><\/a><figcaption class=\"wp-caption-text\">Portrait by scanning electron microscope, artistically colorized<\/figcaption><\/figure>\n<p>&nbsp;<\/p>\n<p><b>Signaling, up, down and sideways<\/b><\/p>\n<p><span style=\"font-weight: 400\">The big picture is that mitochondria take their orders from the cell nucleus, where the vast majority of the DNA is housed. \u00a0The transcription factors that determine what mitochondrial genes are expressed are housed in the nucleus. \u00a0In addition, there is feedback, <\/span><a href=\"http:\/\/downloads.hindawi.com\/journals\/oximed\/2013\/351613.pdf\"><span style=\"font-weight: 400\">retrograde signaling<\/span><\/a><span style=\"font-weight: 400\">, by which mitochondria communicate to the nucleus the state of their own health and of the cell\u2019s energy mtabolism in general. \u00a0The nucleus responds with changes in transcription based on communication from the mitochondria.<\/span><\/p>\n<p><span style=\"font-weight: 400\">A great part of the diverse benefits of <\/span><a href=\"https:\/\/www.nature.com\/nchembio\/journal\/v1\/n7\/full\/nchembio1205-355.html\"><span style=\"font-weight: 400\">caloric restriction<\/span><\/a><span style=\"font-weight: 400\">, and perhaps of <\/span><a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S0891584916000502?via%3Dihub\"><span style=\"font-weight: 400\">exercise, too<\/span><\/a><span style=\"font-weight: 400\">, are thought to originate in signaling from the mitochondria. \u00a0<\/span><\/p>\n<p><span style=\"font-weight: 400\">In addition to sending and receiving signals from the cell nucleus, mitochondria talk to each other. \u00a0They coordinate extensively within a cell, and they also generate hormones that are transmitted through the bloodstream, talking to distant cells and foreign mitochondria.<\/span><\/p>\n<p>&nbsp;<\/p>\n<p><b>Mitochondria and Cancer<\/b><\/p>\n<p><span style=\"font-weight: 400\">Cancer cells have <\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4371788\/\"><span style=\"font-weight: 400\">impaired mitochondrial metabolism<\/span><\/a><span style=\"font-weight: 400\">. \u00a0They don\u2019t burn sugar through the usual, high-efficiency mode that combines with the maximal amount of oxygen; rather they use fermentation\u2014anaerobic breakdown of sugar. \u00a0Cancer cells do this even when oxygen is plentiful, despite the fact that it generates much less energy per sugar molecule. \u00a0Cancer cells are starved for energy, and they gobble up sugar at a high rate. \u00a0(<\/span><a href=\"https:\/\/en.wikipedia.org\/wiki\/Positron_emission_tomography\"><span style=\"font-weight: 400\">PET scans<\/span><\/a><span style=\"font-weight: 400\"> are able to visualize tumors on the basis of their sugar consumption.) \u00a0Eating a very-low-carb diet is a <a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S2213231714000925\">cancer therapy<\/a>. \u00a0<\/span><\/p>\n<p><span style=\"font-weight: 400\">90 years ago, a Nobelist and Big Thinker in biomedicine named Otto Warburg gave us the hypothsis that mitochondria with impaired glucose metabolism are the root cause of cancer. \u00a0We usually think of cancer as starting with mutations that lead to uncontrolled growth and proliferation, but in the <\/span><a href=\"https:\/\/www.amazon.com\/Tripping-Truth-Metabolic-Theory-Cancer\/dp\/1500600318\"><span style=\"font-weight: 400\">Metabolic Theory of Cancer<\/span><\/a><span style=\"font-weight: 400\">, mutations and proliferation are secondary to this change in mitochondrial chemistry. \u00a0Today, <\/span><a href=\"http:\/\/www.bc.edu\/sites\/libraries\/facpub\/seyfried-cancer\/book.pdf\"><span style=\"font-weight: 400\">proponents<\/span><\/a><span style=\"font-weight: 400\"> of the Warburg Hypothesis are a small but enthusiastic minority, armed with facts and arguments that I have not yet found time to assess. \u00a0But I am struck by the fact that when the nucleus of a cancer cell is transplanted into a healthy cell, the healthy cell remains healthy; and when the nucleus of a healthy cell is transplanted into a cancer cell, the cell remains cancerous [<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/3654482\/\"><span style=\"font-weight: 400\">ref<\/span><\/a><span style=\"font-weight: 400\">, <\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4493566\/\"><span style=\"font-weight: 400\">ref<\/span><\/a><span style=\"font-weight: 400\">]. \u00a0This seems to be <\/span><i><span style=\"font-weight: 400\">prima facie<\/span><\/i><span style=\"font-weight: 400\"> evidence that the essence of cancer is not to be found in chromosomes of the nucleus.<\/span><\/p>\n<p>&nbsp;<\/p>\n<p><b>Fewer, less efficient, and more toxic waste with age<\/b><\/p>\n<p><span style=\"font-weight: 400\">We have fewer mitochondria as we age, and this is plausibly connected to lower muscle strength and endurance as well as energy in the organ that uses energy most intensively=the brain [<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4580208\/\"><span style=\"font-weight: 400\">ref<\/span><\/a><span style=\"font-weight: 400\">]. \u00a0The relationship is subtle enough that it is not completely nailed down, despite decades of work from true believers. \u00a0Since mitochondria mediate apoptosis, it is also plausible that loss of muscle cells and nerve cells with age (at least partially through apoptosis) is also mediated by mitochondria.<\/span><\/p>\n<figure style=\"width: 1040px\" class=\"wp-caption alignnone\"><img loading=\"lazy\" decoding=\"async\" class=\"size-large\" src=\"https:\/\/daily.jstor.org\/wp-content\/uploads\/2016\/05\/mitochondria_1050x700.jpg\" width=\"1050\" height=\"700\" \/><figcaption class=\"wp-caption-text\">Cells that need a lot of energy have a lot of mitochondria. Heart muscle cells are packed with them.<\/figcaption><\/figure>\n<p><span style=\"font-weight: 400\">Compounding the problem, the mitochondria that we do have become less efficient with age. \u00a0They are giving us less energy, and they are generating more reactive oxygen species (ROS). \u00a0Simultaneously, the cell is generating less of the native anti-oxidants that protect from ROS. \u00a0Glutathione, ubiquinone, and superoxide dismutase all decline with age. \u00a0This is one of the ways the body destroys itself. \u00a0Oxidative damage accumulates in old but not young people. \u00a0Oxidative damage may also contribute to <\/span><a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S0531556505000811\"><span style=\"font-weight: 400\">telomere shortening<\/span><\/a><span style=\"font-weight: 400\">.<\/span><\/p>\n<p><span style=\"font-weight: 400\">Somehow, ROS generated by impaired mitochondria produce damage that accumulates, but ROS generated by exercise signal the body to ramp up the repair processes, and produce a net gain in health. \u00a0It is not clear how the two processes are distinguished. \u00a0The reason that anti-oxidants don\u2019t work to extend lifespan is probably that they interfere with the signaling functions of ROS.<\/span><\/p>\n<p>The best-documented way in which mitochondria deteriorate is that their DNA develops mutations. \u00a0I find this something of a conundrum\u2014not that mitochondria should accumulate mutations over the course of a lifetime but that they <b><i>don\u2019t<\/i><\/b> <span style=\"font-weight: 400\">accumulate mutations from one generation to the next (in the germline). \u00a0Mitochondria proliferate clonally, without sex. \u00a0Sex shuffles genes in many combinations, so that the good genes can be separated from the mutated ones, and the latter eliminated before they get fixed into the genome. \u00a0Without sex, how do mitochondria avoid accumulating mutations over the aeons? \u00a0And since they largely <\/span><b><i>do <\/i><\/b><span style=\"font-weight: 400\">manage to avoid accumulating mutations over millions of years, why can\u2019t they avoid accumulating mutations over the course of a few decades within a human body?<\/span><\/p>\n<p>&nbsp;<\/p>\n<p><b>Are mutations in mitochondrial DNA a cause of aging?<\/b><\/p>\n<p>Mitochondrial mutations accumulate with age. \u00a0Genetically modified mice with a defective gene for replication of mitochondrial (but not nuclear) DNA age faster and die earlier. \u00a0This has generally been taken as proof that mitochondrial mutations are a factor in aging, but it need not be so. \u00a0In fact, mitochondria function well with a high tolerance for genetic errors, and it is not clear whether levels of mitochondrial mutations in aging humans cause significant problems, or even whether mutations are related to the general decline in mitochondrial function with age. \u00a0An alternative explanation for the mito-mutator mice is that they have developmental problems already <i>in utero<\/i>, and these may lead to premature aging even without accumulation of mito mutations.<\/p>\n<figure style=\"width: 788px\" class=\"wp-caption alignnone\"><img loading=\"lazy\" decoding=\"async\" class=\"size-large\" src=\"https:\/\/www.researchgate.net\/profile\/Yoshiaki_Kikkawa\/publication\/235650592\/figure\/fig4\/AS:213841624473604@1427995224271\/A-Kaplan-Meier-survival-curves-of-mtDNA-mutator-mice-and-mito-miceD-Median-survival.png\" width=\"798\" height=\"929\" \/><figcaption class=\"wp-caption-text\">Mitochondrial mutator mice<\/figcaption><\/figure>\n<p>Stem cells keep dividing and producing new functional (differentiated) cells through the life of the animal. \u00a0They seem smart enough to minimize the damage from mitochondrial mutations. \u00a0Stem cells have been observed to hold on to the best mitochondria, and pass the damaged ones off to the cells that have a limited lifetime. This helps keep the errors from proliferating, and is in the best interest of the organism as a whole. \u00a0It\u2019s interesting that mother budding yeast cells do the opposite\u2014they hold on to their damaged mitochondria and pass the cleanest and purest on to their daughter cells [<a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S0531556510001300\">ref<\/a>]. \u00a0Mammalian mothers also seem able to choose the best mitochondria to pass to their daughters, purifying the germline [<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC2214808\/\">ref<\/a>]. \u00a0In other words, though their behavior is the opposite of stem cells, both behaviors are adaptive for the long-term interest of the organism (and its progeny).<\/p>\n<blockquote><p>In summary, the age-related increases in oxidative damage and ROS production are relatively small and may not explain the rather severe physiological alterations occurring during aging. Consistent with this hypothesis, the absence of a clear correlation between oxidative stress and longevity [across species] also suggests that oxidative damage does not play an important role in age-related diseases (e.g., cardiovascular diseases, neurodegenerative diseases, diabetes mellitus) and aging. Experimental results from mtDNA mutator mice suggest that mtDNA mutations in somatic stem cells may drive progeroid phenotypes without increasing oxidative stress, thus indicating that mtDNA mutations that lead to a bioenergetic deficiency may drive the aging process [but this is not assured, since these mice seem to suffer substantial damage already <em>in utero<\/em>]. There is as yet no firm evidence that the overall low levels of mtDNA mutations found in mammals drive the normal aging process. One way to address this experimentally would be to generate anti-mutator animal models to determine whether decreased mtDNA mutation rates prolong their life span. <em>[<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3582127\/\">Bratic &amp; Larsson review<\/a>]<\/em><\/p><\/blockquote>\n<p>&nbsp;<\/p>\n<p><b>Mitochondrial evolutionary conundrum<\/b><\/p>\n<p>Mitochondria reproduce clonally, like bacteria. \u00a0In fact, all the mitochondria in your body were inherited from one of your mother\u2019s egg cells, and she got her mitochondria from your maternal grandmother, and so forth back in time\u2014matrilineal all the way. \u00a0How is it that defects don\u2019t accumulate in the mitochondrial genome?<\/p>\n<p>As far as I know, the way in which the integrity of the mitochondrial genome is maintained remains an unsolved problem. \u00a0We do know that mutations in mitochondrial DNA increase with age in some tissues but not others [<a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S0002929707627463\">ref<\/a>]. \u00a0The reason you have to speak up when you talk to your grandmother is probably related to mitochondrial defects in neurons [<a href=\"http:\/\/science.sciencemag.org\/content\/309\/5733\/481.full\">ref<\/a>].<\/p>\n<p>Over the course of millions of years, mitochondria do not lose their genetic integrity, though the mitochondrial genome evolves more rapidly than the nuclear genome, and different species tend to have distinctive mitochondrial genomes. \u00a0The mystery is why detrimental mutations should accumulate over decades, but not over aeons.<\/p>\n<p>To me, this is powerful evidence that there is a mechanism for managing the evolution of the mitochondrial genome. \u00a0It probably involves selection by the cell so that mitochondria that are functioning efficiently are encouraged to reproduce. \u00a0The cell acts like a human lab that is breeding tomatoes or Labrador retrievers for specific characteristics that the breeder or the cell finds most useful. \u00a0Probably there is also gene exchange among the different copies of the plasmid within a mitochondrion, and between mitochondria as they sometimes merge during the lifetime of a cell (my speculation).<\/p>\n<p>&nbsp;<\/p>\n<p><b>What\u2019s going on?<\/b><\/p>\n<p>A theme in this blog (and in my thinking) has been that aging is not a dispersed process of locally-occurring damage, but is centrally orchestrated. \u00a0Well, mitochondria are about as far from \u201ccentral\u201d as you can get. \u00a0We have about a quadrillion of them, dispersed through every cell in the body (<a href=\"https:\/\/pimm.wordpress.com\/2007\/01\/19\/are-there-any-mitochondria-in-our-red-blood-cells\/\">except red blood cells<\/a>).<\/p>\n<p>Mitochondria talk to each other within a single cell. \u00a0They merge and they reproduce, coordinating with one another and with the cell nucleus. \u00a0Now it appears they also send signals through the bloodstream (more next week). \u00a0Could they be acting like a single organ, dispersed through the body? Maybe. \u00a0Sensing the body\u2019s state of energy usage and fuel sufficiency, they send signals that contribute to calculations about lifespan.<\/p>\n<p>My guess is that aging is coordinated by a few biological clocks (centralized like the suprachiasmatic nucleus and the thymus or dispersed like telomeres and methylation patterns), and that mitochondria are not counted among the clocks. \u00a0But mitochondria are important intermediates. \u00a0The old story is that they generate energy and generate tissue-damaging ROS. \u00a0The new story is that they are also centers of signal transduction, probably based on their first-hand knowledge of the energy status of the body.<\/p>\n<p style=\"text-align: center\">End of Part I.<br \/>\nNext week, I will discuss some supplements<br \/>\nand health strategies based on mitochondria.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>A popular theory a generation back sought to trace aging to oxidative damage originating in the mitochondria. \u00a0Every cell in the body has hundreds or thousands of mitochondria, the sites of the high-energy chemistry that produces ROS as toxic waste. The hope was that by quenching the ROS, aging might be turned off. The \u201cMitochondrial &#8230; <a title=\"Mitochondria in Aging, I Mechanisms and Background\" class=\"read-more\" href=\"https:\/\/scienceblog.com\/joshmitteldorf\/2017\/07\/14\/mitochondria-in-aging-i-mechanisms-and-background\/\" aria-label=\"Read more about Mitochondria in Aging, I Mechanisms and Background\">Read more<\/a><\/p>\n","protected":false},"author":65,"featured_media":592,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[1],"tags":[],"class_list":["post-591","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-uncategorized"],"yoast_head":"<!-- This site is optimized with the Yoast SEO Premium plugin v27.4 (Yoast SEO v27.4) - https:\/\/yoast.com\/product\/yoast-seo-premium-wordpress\/ -->\n<title>Mitochondria in Aging, I Mechanisms and Background - Josh Mitteldorf<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/scienceblog.com\/joshmitteldorf\/2017\/07\/14\/mitochondria-in-aging-i-mechanisms-and-background\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Mitochondria in Aging, I Mechanisms and Background\" \/>\n<meta property=\"og:description\" content=\"A popular theory a generation back sought to trace aging to oxidative damage originating in the mitochondria. \u00a0Every cell in the body has hundreds or thousands of mitochondria, the sites of the high-energy chemistry that produces ROS as toxic waste. The hope was that by quenching the ROS, aging might be turned off. The \u201cMitochondrial ... 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The surprising fact that our bodies are genetically programmed to age and to die offers an enormous opportunity for medical intervention. It may be that therapies to slow the progress of aging need not repair or regenerate anything, but only need to interfere with an existing program of self-destruction. Mitteldorf has taught a weekly yoga class for thirty years. He is an advocate for vigorous self care, including exercise, meditation and caloric restriction. After earning a PhD in astrophysicist, Mitteldorf moved to evolutionary biology as a primary field in 1996. He has taught at Harvard, Berkeley, Bryn Mawr, LaSalle and Temple University. He is presently affiliated with MIT as a visiting scholar. In private life, Mitteldorf is an advocate for election integrity as well as public health. He is an avid amateur musician, playing piano in chamber groups, French horn in community orchestras. His two daughters are among the first children adopted from China in the mid-1980s. Much to the surprise of evolutionary biologists, genetic experiments indicate that aging has been selected as an adaptation for its own sake. This poses a conundrum: the impact of aging on individual fitness is wholly negative, so aging must be regarded as a kind of evolutionary altruism. Unlike other forms of evolutionary altruism, aging offers benefits to the community that are weak, and not well focussed on near kin of the altruist. 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