Getting through the matrix

The best cancer drugs in the world are not much good if they cannot get to tumor cells. That problem has been challenging cancer physicians and researchers for years because the physical structure of many tumors can prevent anticancer agents from reaching their targets. In a study appearing in the June issue of Nature Medicine, researchers from Massachusetts General Hospital (MGH) describe a new technique for assessing the permeability of tumors and a promising new way of improving tumors’ accessibility to drugs.

Enzyme structure holds key to cocaine, heroin metabolism

A new study offers the first molecular explanation of how the body metabolizes and detoxifies cocaine and heroin. “We show for the first time how humans initiate the breakdown and clearance of these dangerous narcotics,” said one of the lead scientists. “This work also has two potential applications. First, our results can be used to generate an efficient treatment for cocaine overdose. Second, the same system we describe can be engineered to detoxify chemical weapons, including sarin, soman, tabun and VX gases.”

'Periodic Table' of proteins helps make sense of structure

Scientists at the University of California, Berkeley, and Lawrence Berkeley National Laboratory have taken the first stab at a “periodic table” of the protein structures – an organized map of the building blocks used over and over again to construct the billions of complex proteins that make up life on Earth. The three-dimensional map depicts similarities and differences among the building blocks, letting scientists visualize the universe of possible protein structures – the many possible twists, turns and folds – and see evolutionary changes that may have occurred with time.

DNA folding, protein activities much more complex than expected

New molecular technologies are exposing unexpectedly high levels of DNA folding and complex protein-rich assemblages within the nucleus of cells that researchers say seriously challenge the textbook models. “What we are seeing suggests that there may be machinery, not yet identified, that controls the folding and the movements of enzymes that turn genes on and off,” noted one expert at the recent meeting of the American Association for the Advancement of Science.